Genomic characterization of environmental Klebsiella pneumoniae through whole genome sequencing

Genomic characterization of environmental Klebsiella pneumoniae through whole genome sequencing

This thesis submitted to the Department of Mathematics and Natural Sciences in partial fulfillment of the requirements for the degree of Master of Science in Biotechnology, 2024.

Bibliografiset tiedot
Päätekijä:	Sharmin, Mehbooba
Muut tekijät:	Naser, Iftekhar Bin
Aineistotyyppi:	Opinnäyte
Kieli:	English
Julkaistu:	Brac University 2024
Aiheet:	Klebsiella pneumoniae Antimicrobial Susceptibility Testing (AST) Whole Genome Sequencing (WGS) Sanger sequencing Klebsiella pneumoniae. Genomic characterization > mapping > Bangladesh.
Linkit:	http://hdl.handle.net/10361/24010

Samankaltaisia teoksia

Principles of genome analysis and genomics /
Tekijä: Primrose, S. B.
Julkaistu: (2003)

In silico drug designing against Klebsiella pneumoniae adhesin protein
Tekijä: Hoq, Muntasirul
Julkaistu: (2019)

Evaluation of MicrocinE492 gene presence in Klebsiella pneumoniae isolated from clinical samples.
Tekijä: Islam, Faria
Julkaistu: (2019)

Isolation and characterization of Klebsiella pneumoniae from medical waste and adjoining community water
Tekijä: Selim, Sadia Binte, et al.
Julkaistu: (2023)

A prospective study on the efficiency of ciprofloxacin in combination with chloramphenicol and probiotics against multiple antibiotics resistant Klebsiella pneumoniae
Tekijä: Ahmed, Akash
Julkaistu: (2018)

Prevalence and molecular characterization of extended spectrum Beta-Lactamase producing multidrug-resistant Pseudomonas aeruginosa and Klebsiella pneumoniae isolates
Tekijä: Afsana, Sadia
Julkaistu: (2018)

Study of the antimicrobial activities of the bark extract of cinnamomum verum on multi drug resistant klebsiella pneumoniae and enterobacter agglomerans
Tekijä: Mahmud-Un-Nabi, Mohammad Al
Julkaistu: (2015)

The combined effect of Moxifloxacin and Ciprofloxacin against multidrug-resistant Klebsiella pneumoniae
Tekijä: Hossain, Mehrin, et al.
Julkaistu: (2022)

Comparative study on the antibacterial activities of neem oil, mustard oil and black seed oil against staphylococcus aureus, klebsiella pneumoniae, bacillus cereus, salmonella typhi and pseudomonas aeruginosa
Tekijä: Shova, Nishat Anzum
Julkaistu: (2017)

Isolation of Klebsiella pneumoniae and Acinetobacter baumannii from street vended cut fruits sold in Dhaka city of Bangladesh and their antibiotic susceptibility pattern
Tekijä: Farid(Safa), Saima Binta, et al.
Julkaistu: (2024)

Analysis of multidrug resistant Klebsiella pneumoniae and Enterobacter aggalomerans isolates from under five children suffering from acute respiratory infections in Dhaka, Bangladesh.
Tekijä: Chowdhury, Samina Kabir
Julkaistu: (2015)

Combined effect of Cefixime and Azithromycin against multiple antibiotics resistant Klebsiella pneumoniae and Pseudomonas aeruginosa
Tekijä: Salahuddin, Fariba
Julkaistu: (2020)

Isolation and characterization of bacteriophage from environmental water samples specific for Klebsiella pneumoniae
Tekijä: Roy, Arka
Julkaistu: (2018)

Isolation of Lytic Bacteriophages from Environmental water samples specific to Vibrio cholerae; software-based analysis of whole-genome using bioinformatics tools
Tekijä: Arthi, Safwana Murshed
Julkaistu: (2021)

Diversity of salmonella typhi-phages in Dhaka city through whole genome sequencing
Tekijä: Islam, Shuborno
Julkaistu: (2024)

Virulence determinants and antibiotic resistance of Extended-Spectrum Beta-lactamase (ESBL) producing Klebsiella pneumoniae Isolated from hospital environment
Tekijä: Costa, Dorin Teresa D.
Julkaistu: (2020)

Prevalence of Carbapenem-resistant Klebsiella pneumoniae in vegetable and water samples in Dhaka South
Tekijä: Raymond, Mugenyi, et al.
Julkaistu: (2022)

Principles of gene manipulation and genomics /
Tekijä: Primrose, S. B.
Julkaistu: (2006)

Detection Extended Spectrum β-Lactamase (ESBL) and Carbapenemase encoding Klebsiella pneumoniae isolates from hospital effluent wastewater and hospital adjacent community tap water in Dhaka metropolitan city
Tekijä: Siddique, Sifat Sarwa, et al.
Julkaistu: (2023)

Method optimization for isolation of Klebsiella Bacteriophage from soil samples
Tekijä: Khan, Zumana Hayat
Julkaistu: (2021)

The antibacterial activities of Peppermint oil, Mustard oil and Clove oil on Klebsiella pneumonia, Acinetobacter baumannii, and Pseudomonas taetrolens
Tekijä: Meem, Umara
Julkaistu: (2022)

Detection of multidrug-resistant Klebsiella pneumoniae in chicken samples collected from wet markets of Dhaka City
Tekijä: Turna, Adrita Saha, et al.
Julkaistu: (2023)

The prevalence of multi-drug-resistant staphylococcus aureus and klebsiella pneumoniae in cooked meat samples collected from hospital cafeterias in the Dhaka city corporation area
Tekijä: Hoque, Mahmuda, et al.
Julkaistu: (2024)

Genomes 3 /
Tekijä: Brown, T. A. (Terence A.)
Julkaistu: (2007)

Isolation of Klebsiella pneumoniae from water and hand swabs of vegetable vendors collected from the wet markets of Dhaka city
Tekijä: Zaman, Afsana, et al.
Julkaistu: (2024)

Carbapenem resistance gene Ppofiling in Klebsiella pneumoniae isolated from clinical and non-clinical (water and vegetables) samples
Tekijä: Neha, Afra Anan, et al.
Julkaistu: (2024)

Seqdev: an algorithm for constructing genetic elements using comparative assembly
Tekijä: Rahman, Tasnim, et al.
Julkaistu: (2017)

The dynamic genome
Tekijä: Fontdevila, Antonio

A descriptive review on Monkeypox virus from past to present
Tekijä: Halder, Angelina Samantha
Julkaistu: (2024)

Isolation of Enterobacter spp. and Klebsiella pneumoniae from ready-to-eat commercially sold frozen nuggets sold in Dhaka
Tekijä: Banik, Aditya, et al.
Julkaistu: (2024)

Pan-genome analysis of Alistipes Genomes: Exploration of diversity and pathogenicity
Tekijä: Nath Tonmoy, Joy Deb
Julkaistu: (2023)

The combined effect of Levofloxacin and Azithromycin against multidrug-resistant Acinetobacter baumannii, Klebsiella pneumoniae, and Pseudomonas aeruginosa.
Tekijä: Belal, Progga Parmita
Julkaistu: (2023)

Statistical theory and methods for evolutionary genomics
Tekijä: Gu, Xun

Briefings in Functional Genomics

Briefings in Functional Genomics

A review on the causative agents, risk factors and management of ventilator associated Pneumonia: from South Asian perspective
Tekijä: Naboni, Nahian Sanjida
Julkaistu: (2022)

Prevalence of different variants of Klebsiella pneumoniae in urine samples: a review
Tekijä: Hossain, Mahi Tasnim
Julkaistu: (2024)

Aging of the genome
Tekijä: Vijg, Jan

Ancestral sequence reconstruction

Analysis and comparison between the Genome of CRISPR bacteriophages
Tekijä: Muntaha, Mumtasin
Julkaistu: (2021)